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chip seq
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Unable to annotate the differential peaks from DiffBind using ChIPseeker
chip seq
ChIPseeker
peak annotation
annotatePeak()
Diffbind
4.7 years ago
researcher
• 0
1
vote
8
replies
1.3k
views
Diffbind multiple blocking factor
diffbind
rory stark
chip seq
updated 3.5 years ago by
Rory Stark
★ 5.2k • written 4.1 years ago by
bioinfouser2
▴ 10
0
votes
1
reply
889
views
How to find sites with H3K27me3 loss?
Chip Seq
Histone
H3K27me3
macs
diffbind
4.7 years ago
researcher
• 0
0
votes
0
replies
444
views
How can I analyse ChIP-seq and BioID results and functionally grouping them
analyse
ChIP Seq
bioID
functional
grouping
4.4 years ago
rergin
• 0
4 results • Page
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Comment: all variables in design formula must be columns in colData (Deseq2) error
by
Galina
• 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
robersy
• 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Well, if I look at genes with baseMean>50, then the relative absolute difference in log2FoldChange (say over the absolute log2FoldChange of…
Votes
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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